Basic Information
Locus ID:
Tel5E01G585100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 458871180 | 458872504 | + | Tel5E01G585100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 30,311.23 Da | 31.74 | 105.60 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 30 | 47 | 0.45 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 55 | 75 | 0.86 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 131 | 253 | 7.6E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 256 | 1.78E-36 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 5 | 99 | 1.19E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 134 | 276 | 5.0E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 133 | 1.9E-20 | IPR032675 |
| SMART | SM00220 | serkin_6 | 50 | 277 | 7.9E-6 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 28 | 52 | 6.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 53 | 77 | 4.8 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 30 | 52 | 7.142103 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 277 | 21.785454 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 178 | 190 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 53 | 66 | 4.0E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 31 | 44 | 4.0E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_045084650.1 | leucine-rich repeat receptor-like kinase protein CLV1a [Aegilops tauschii subsp. strangulata] | 0 |
| Q8GRU6 | Leucine-rich repeat receptor-like kinase protein HAR1 OS=Lotus japonicus OX=34305 GN=HAR1 PE=1 SV=1 | 0 | |
| TrEMBL | N1QXT2 | Receptor-like protein kinase 5 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0696 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0506810.1.CDS1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr10G016360 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G585100 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG053750 |
| Poaceae | Triticum aestivum | 1 | TraesCS5A02G367100.1 |