Basic Information
Locus ID:
Tel5E01G575200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 452639602 | 452642215 | + | Tel5E01G575200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 46,683.33 Da | 51.49 | 88.15 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 80 | 155 | 5.33752E-15 | - |
| CDD | cd00121 | MATH | 291 | 412 | 9.25282E-4 | IPR002083 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 192 | 272 | 3.3E-6 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 79 | 170 | 9.2E-17 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 293 | 415 | 8.01E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 80 | 169 | 3.06E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 16 | 203 | 7.8E-22 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 204 | 302 | 3.1E-6 | - |
| SMART | SM00225 | BTB_4 | 37 | 172 | 1.9E-13 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 65 | 140 | 13.342936 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_037431403.1 | BTB/POZ domain-containing protein POB1-like [Triticum dicoccoides] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7QHQ6 | BTB domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.5HG0505050.1, HORVU.MOREX.r3.5HG0505080.1 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_007033, gene-QYE76_007066, gene-QYE76_007067 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0402061, Pt_Chr0700949, Pt_Chr0700950, Pt_Chr0700951 |
| Poaceae | Thinopyrum elongatum | 3 | Tel5E01G574500, Tel5E01G575100, Tel5E01G575200 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC5AG052540, gene_TRIDC5AG052560 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS5A02G359000.1, TraesCS5A02G359400.1 ... |