halophFGD

Basic Information

Locus ID: Tel5E01G496600

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description: A Receptor for Ubiquitination Targets

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	411952967	411976587	+	Tel5E01G496600

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.35	37,726.17 Da	41.54	65.98	-0.50

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	59	203	7.7E-13	IPR017451
MobiDBLite	mobidb-lite	consensus disorder prediction	1	51	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	14	28	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_044401664.1	F-box protein At3g07870-like [Triticum aestivum]	0
TrEMBL	A0A023IND3	Putative F-box protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate04g01450
Poaceae	Echinochloa crus-galli	40	AH02.2360, AH05.2615, AH06.2492, AH07.2155, AH08.1915 ... AH08.1916, AH08.1936, AH08.1937, AH08.1938, AH08.1939, BH05.2696, BH05.2697, BH05.2698, BH07.2120, BH08.2003, BH08.2006, BH08.2007, BH08.2008, BH08.2027, BH08.2028, BH08.2029, BH08.2030, CH01.4744, CH01.4745, CH02.290, CH03.1904, CH07.2029, CH07.2892, CH07.708, CH07.709, CH08.2186, CH08.2188, CH08.2189, CH08.2190, CH08.2191, CH08.2192, CH08.2205, CH08.2206, CH08.2207, CH08.2208
Poaceae	Eleusine coracana subsp. coracana	20	gene-QOZ80_2AG0116100, gene-QOZ80_2AG0116110 ... gene-QOZ80_5BG0421620, gene-QOZ80_8AG0635480, gene-QOZ80_8AG0635490, gene-QOZ80_8AG0635500, gene-QOZ80_8AG0635510, gene-QOZ80_8AG0635530, gene-QOZ80_8AG0635760, gene-QOZ80_8AG0635770, gene-QOZ80_8AG0635800, gene-QOZ80_8AG0635810, gene-QOZ80_8BG0664320, gene-QOZ80_8BG0664480, gene-QOZ80_8BG0664510, gene-QOZ80_8BG0664520, gene-QOZ80_8BG0664530, gene-QOZ80_8BG0664540, gene-QOZ80_8BG0664550, gene-QOZ80_8BG0664560
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.2HG0206410.1.CDS1 ... HORVU.MOREX.r3.3HG0328590.1, HORVU.MOREX.r3.3HG0328700.1, HORVU.MOREX.r3.3HG0328710.1, HORVU.MOREX.r3.7HG0657500.1.CDS1, HORVU.MOREX.r3.7HG0657550.1.CDS1, HORVU.MOREX.r3.7HG0657570.1
Poaceae	Lolium multiflorum	52	gene-QYE76_000480, gene-QYE76_004239, gene-QYE76_006658 ... gene-QYE76_006741, gene-QYE76_006742, gene-QYE76_006745, gene-QYE76_006902, gene-QYE76_007508, gene-QYE76_008741, gene-QYE76_008806, gene-QYE76_009345, gene-QYE76_013006, gene-QYE76_014394, gene-QYE76_014395, gene-QYE76_014398, gene-QYE76_014400, gene-QYE76_017334, gene-QYE76_017549, gene-QYE76_018016, gene-QYE76_019903, gene-QYE76_019904, gene-QYE76_019905, gene-QYE76_019999, gene-QYE76_020064, gene-QYE76_020070, gene-QYE76_020074, gene-QYE76_020800, gene-QYE76_030923, gene-QYE76_030925, gene-QYE76_030929, gene-QYE76_030930, gene-QYE76_037914, gene-QYE76_038422, gene-QYE76_046980, gene-QYE76_055918, gene-QYE76_056424, gene-QYE76_056426, gene-QYE76_056439, gene-QYE76_057290, gene-QYE76_058262, gene-QYE76_058263, gene-QYE76_058751, gene-QYE76_058752, gene-QYE76_058754, gene-QYE76_058755, gene-QYE76_058757, gene-QYE76_058758, gene-QYE76_058759, gene-QYE76_058761, gene-QYE76_058764, gene-QYE76_065272, gene-QYE76_071875
Poaceae	Oryza coarctata	11	Oco15G011940, Oco15G011950, Oco15G011960, Oco16G010630 ... Oco16G010640, Oco16G010890, Oco23G006760, Oco23G006770, Oco24G006440, Oco24G006460, Oco24G006470
Poaceae	Oryza sativa	12	LOC_Os07g39570.1, LOC_Os08g38470.1, LOC_Os08g38480.1 ... LOC_Os08g38490.1, LOC_Os08g38520.1, LOC_Os08g38540.1, LOC_Os12g30920.1, LOC_Os12g30940.1, LOC_Os12g30950.1, LOC_Os12g30960.1, LOC_Os12g30980.1, LOC_Os12g30990.1
Poaceae	Paspalum vaginatum	3	gene-BS78_02G092300, gene-BS78_07G176700 ... gene-BS78_07G176800
Poaceae	Puccinellia tenuiflora	32	Pt_Chr0100935, Pt_Chr0200804, Pt_Chr0201487, Pt_Chr0305781 ... Pt_Chr0305832, Pt_Chr0403309, Pt_Chr0500288, Pt_Chr0500292, Pt_Chr0500301, Pt_Chr0500302, Pt_Chr0500622, Pt_Chr0500625, Pt_Chr0500681, Pt_Chr0500684, Pt_Chr0500697, Pt_Chr0504789, Pt_Chr0504790, Pt_Chr0600892, Pt_Chr0600894, Pt_Chr0605414, Pt_Chr0605415, Pt_Chr0605417, Pt_Chr0605418, Pt_Chr0605419, Pt_Chr0605421, Pt_Chr0605424, Pt_Chr0605767, Pt_Chr0605768, Pt_Chr0605769, Pt_Chr0605772, Pt_Chr0704145, Pt_Chr0704174
Poaceae	Sporobolus alterniflorus	4	Chr01G021340, Chr0G003860, Chr20G000380, Chr22G009410
Poaceae	Thinopyrum elongatum	9	Tel1E01G564300, Tel2E01G139500, Tel2E01G889300 ... Tel2E01G891100, Tel5E01G328900, Tel5E01G496600, Tel5E01G496900, Tel5E01G497000, Tel7E01G276300
Poaceae	Triticum aestivum	24	TraesCS1D02G340200.1, TraesCS2A02G060300.1 ... TraesCS2A02G060800.1, TraesCS2A02G522800.1.cds1, TraesCS2B02G552900.1.cds1, TraesCS2D02G524600.1.cds1, TraesCS2D02G524700.1.cds1, TraesCS2D02G524800.1.cds1, TraesCS2D02G525100.1.cds1, TraesCS5A02G309400.1.cds1, TraesCS5A02G309500.1.cds1, TraesCS5B02G310200.1.cds1, TraesCS5B02G310300.1.cds1, TraesCS5B02G530700.1.cds1, TraesCS5D02G316500.1.cds1, TraesCS5D02G316600.1.cds1, TraesCS7A02G140000.1.cds1, TraesCS7A02G141200.1.cds1, TraesCS7B02G041800.1.cds1, TraesCS7B02G300900.1.cds1, TraesCS7D02G141200.1.cds1, TraesCS7D02G141400.1.cds1, TraesCS7D02G142500.1.cds1, TraesCSU02G210300.1.cds1
Poaceae	Zoysia japonica	1	nbis-gene-47607