Basic Information
Locus ID:
Tel5E01G493500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 410001186 | 410002265 | - | Tel5E01G493500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 39,896.04 Da | 49.43 | 96.99 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 71 | 1.7E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 165 | 255 | 9.68E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 122 | 337 | 1.4E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 60 | 8.5E-7 | - |
| SMART | SM00256 | fbox_2 | 23 | 63 | 0.0079 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 53 | 9.100053 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56440.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_044401659.1 | uncharacterized protein LOC123125195 [Triticum aestivum] | 0 |
| Q9FM87 | Putative FBD-associated F-box protein At5g56440 OS=Arabidopsis thaliana OX=3702 GN=At5g56440 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6KLU4 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.3291, BH03.2786, CH03.2982, CH03.3687 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0529460 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_006671, gene-QYE76_006674, gene-QYE76_006679 |
| Poaceae | Oryza coarctata | 1 | Oco13G009480 |
| Poaceae | Oryza sativa | 1 | LOC_Os12g41300.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G493500 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G307800.1, TraesCS5B02G308000.1.cds1 ... |