Basic Information
Locus ID:
Tel5E01G471200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 395355432 | 395359580 | + | Tel5E01G471200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 86,352.57 Da | 41.54 | 86.29 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 702 | 743 | 1.06721E-23 | - |
| CDD | cd01989 | STK_N | 21 | 178 | 1.37303E-36 | - |
| Pfam | PF00069 | Protein kinase domain | 410 | 614 | 1.4E-40 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 19 | 143 | 9.5E-7 | IPR006016 |
| Pfam | PF04564 | U-box domain | 698 | 767 | 9.8E-19 | IPR003613 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 141 | 4.44E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 684 | 766 | 7.33E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 666 | 1.62E-64 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 4 | 152 | 4.3E-10 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 481 | 2.3E-28 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 697 | 770 | 3.5E-28 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 482 | 678 | 2.2E-44 | - |
| SMART | SM00220 | serkin_6 | 407 | 676 | 2.9E-26 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 701 | 764 | 9.3E-31 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 407 | 676 | 32.711037 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 697 | 770 | 35.526096 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 527 | 539 | - | IPR008271 |
| Coils | Coil | Coil | 309 | 329 | - | - |
| Coils | Coil | Coil | 358 | 378 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037442601.1 | U-box domain-containing protein 33-like [Triticum dicoccoides] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LPW4 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology