Basic Information
Locus ID:
Tel5E01G470200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 395182081 | 395183124 | + | Tel5E01G470200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 38,653.31 Da | 57.15 | 79.80 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 226 | 271 | 2.4E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 217 | 281 | 2.26E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 203 | 275 | 2.0E-10 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 227 | 271 | 8.815781 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037468988.1 | uncharacterized protein LOC119341224 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A453L9T0 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology