Basic Information
Locus ID:
Tel5E01G451200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 385847653 | 385848240 | - | Tel5E01G451200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 20,264.71 Da | 51.60 | 70.31 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 147 | 184 | 5.49246E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 146 | 191 | 2.5E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 146 | 191 | 4.24E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 195 | 4.8E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 147 | 184 | 1.8E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 147 | 185 | 11.707369 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 162 | 171 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 58 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_020185241.1 | baculoviral IAP repeat-containing protein 7 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A3B6LPV8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology