HalophFGD

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Basic Information
Locus ID: Tel5E01G448200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 384887023 384888561 - Tel5E01G448200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.84 14,773.85 Da 65.54 75.85 -0.82
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 50 89 1.1E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 38 85 3.4E-6 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 1 17 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 21 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_045084952.1 F-box/LRR-repeat protein At3g26922 isoform X4 [Aegilops tauschii subsp. strangulata] 0
TrEMBL A0A453L7C4 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_9BG0713230
Poaceae Oryza sativa 2 LOC_Os03g24540.1, LOC_Os09g32400.1
Poaceae Paspalum vaginatum 1 gene-BS78_06G259700
Poaceae Thinopyrum elongatum 2 Tel5E01G434900, Tel5E01G448200
Poaceae Triticum dicoccoides 1 gene_TRIDC5BG050800
Poaceae Triticum aestivum 1 TraesCS4D02G340400.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.