HalophFGD

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Basic Information
Locus ID: Tel5E01G434900
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 377888364 377889604 - Tel5E01G434900
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.96 12,200.01 Da 98.50 60.00 -0.77
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 64 96 2.2E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 51 102 9.29E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 60 103 1.0E-5 -
MobiDBLite mobidb-lite consensus disorder prediction 15 61 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048530801.1 uncharacterized protein LOC125509820 [Triticum urartu] 0
TrEMBL A0A8R7QDN1 F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_9BG0713230
Poaceae Oryza sativa 2 LOC_Os03g24540.1, LOC_Os09g32400.1
Poaceae Paspalum vaginatum 1 gene-BS78_06G259700
Poaceae Thinopyrum elongatum 2 Tel5E01G434900, Tel5E01G448200
Poaceae Triticum dicoccoides 1 gene_TRIDC5BG050800
Poaceae Triticum aestivum 1 TraesCS4D02G340400.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.