HalophFGD

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Basic Information
Locus ID: Tel5E01G404200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 362134752 362136149 + Tel5E01G404200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.06 43,308.79 Da 59.63 95.87 0.18
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 17 56 3.8E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 15 64 3.79E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 11 64 1.9E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044401440.1 uncharacterized protein LOC123124959 [Triticum aestivum] 0
TrEMBL A0A3B6MTI3 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 AH02.1467, BH02.1539
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5AG0372460, gene-QOZ80_5BG0419840
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.5HG0488740.1.CDS1
Poaceae Lolium multiflorum 2 gene-QYE76_000689, gene-QYE76_000691
Poaceae Paspalum vaginatum 1 gene-BS78_04G285400
Poaceae Puccinellia tenuiflora 1 Pt_Chr0704298
Poaceae Thinopyrum elongatum 1 Tel5E01G404200
Poaceae Triticum dicoccoides 2 gene_TRIDC5AG039370, gene_TRIDC5BG041810
Poaceae Triticum aestivum 3 TraesCS5A02G252500.1.cds1, TraesCS5B02G251200.1.cds1 ...
TraesCS5D02G260100.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.