Basic Information
Locus ID:
Tel5E01G395200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 355585102 | 355590837 | - | Tel5E01G395200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 104,262.19 Da | 58.43 | 67.53 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 210 | 247 | 8.8E-9 | IPR002893 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 425 | 728 | 1.1E-45 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 421 | 733 | 4.25E-82 | IPR038765 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 207 | 250 | 9.59E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 418 | 740 | 1.2E-89 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 199 | 252 | 1.3E-11 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 425 | 731 | 49.902466 | IPR028889 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 210 | 247 | 11.49032 | IPR002893 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 210 | 247 | - | IPR002893 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 426 | 441 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 837 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 949 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 929 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 867 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 866 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 949 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_044393215.1 | ubiquitin carboxyl-terminal hydrolase 17-like isoform X1 [Triticum aestivum] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453L054 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology