Basic Information
Locus ID:
Tel5E01G383900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
DNA-binding transcription factor activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 348591790 | 348593063 | + | Tel5E01G383900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.85 | 41,385.91 Da | 58.90 | 62.50 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 26 | 116 | 5.9E-31 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 23 | 116 | 4.17E-31 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 18 | 118 | 1.5E-35 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 22 | 116 | 7.9E-58 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 66 | 90 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 26 | 49 | 1.8E-19 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 65 | 77 | 1.8E-19 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 78 | 90 | 1.8E-19 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 388 | - | - |
| Coils | Coil | Coil | 204 | 224 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G46264.1 | heat shock transcription factor B4. Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions. | 0 |
| RefSeq | XP_044397678.1 | heat stress transcription factor B-4c-like [Triticum aestivum] | 0 |
| Q67U94 | Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB4C PE=2 SV=1 | 0 | |
| TrEMBL | A0A453KZ47 | HSF_DOMAIN domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology