Basic Information
Locus ID:
Tel5E01G332500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 306714984 | 306716129 | + | Tel5E01G332500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 40,873.72 Da | 51.40 | 82.23 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 131 | 174 | 2.1105E-19 | - |
| Pfam | PF13639 | Ring finger domain | 131 | 174 | 2.0E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 131 | 179 | 3.79E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 89 | 179 | 2.0E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 132 | 173 | 1.2E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 132 | 174 | 12.931868 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 209 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044397313.1 | RING-H2 finger protein ATL46-like [Triticum aestivum] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453KQV9 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology