Basic Information
Locus ID:
Tel5E01G330000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 304367281 | 304368417 | + | Tel5E01G330000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 42,584.59 Da | 49.65 | 90.79 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 24 | 64 | 1.3E-7 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 211 | 309 | 1.7E-7 | IPR013187 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 127 | 346 | 5.62E-7 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 26 | 72 | 8.37E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 72 | 8.3E-8 | - |
| SMART | SM00256 | fbox_2 | 24 | 64 | 5.0E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 113 | 315 | 9.8E-24 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23960.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_044397290.1 | putative F-box protein At2g02030 [Triticum aestivum] | 0 |
| Q9LIR1 | Putative F-box protein At3g23960 OS=Arabidopsis thaliana OX=3702 GN=At3g23960 PE=4 SV=1 | 0 | |
| TrEMBL | A0A453KQL2 | F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology