HalophFGD

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Basic Information
Locus ID: Tel5E01G328900
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 302915573 302915845 - Tel5E01G328900
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.42 10,310.85 Da 59.47 95.33 -0.30
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 31 65 4.5E-8 IPR001810
SUPERFAMILY SSF81383 F-box domain 30 64 7.33E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 29 79 5.6E-9 -
SMART SM00256 fbox_2 31 71 3.9E-6 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G16810.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_020191203.1 putative F-box protein At5g52610 [Aegilops tauschii subsp. strangulata] 0
Swiss-Prot Q84X43 F-box only protein 8 OS=Arabidopsis thaliana OX=3702 GN=FBX8 PE=2 SV=1 0
TrEMBL A0A3B6DMQ8 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Hydrocharitaceae Thalassia testudinum 1 gene.Thate04g01450
Poaceae Echinochloa crus-galli 40 AH02.2360, AH05.2615, AH06.2492, AH07.2155, AH08.1915 ...
AH08.1916, AH08.1936, AH08.1937, AH08.1938, AH08.1939, BH05.2696, BH05.2697, BH05.2698, BH07.2120, BH08.2003, BH08.2006, BH08.2007, BH08.2008, BH08.2027, BH08.2028, BH08.2029, BH08.2030, CH01.4744, CH01.4745, CH02.290, CH03.1904, CH07.2029, CH07.2892, CH07.708, CH07.709, CH08.2186, CH08.2188, CH08.2189, CH08.2190, CH08.2191, CH08.2192, CH08.2205, CH08.2206, CH08.2207, CH08.2208
Poaceae Eleusine coracana subsp. coracana 20 gene-QOZ80_2AG0116100, gene-QOZ80_2AG0116110 ...
gene-QOZ80_5BG0421620, gene-QOZ80_8AG0635480, gene-QOZ80_8AG0635490, gene-QOZ80_8AG0635500, gene-QOZ80_8AG0635510, gene-QOZ80_8AG0635530, gene-QOZ80_8AG0635760, gene-QOZ80_8AG0635770, gene-QOZ80_8AG0635800, gene-QOZ80_8AG0635810, gene-QOZ80_8BG0664320, gene-QOZ80_8BG0664480, gene-QOZ80_8BG0664510, gene-QOZ80_8BG0664520, gene-QOZ80_8BG0664530, gene-QOZ80_8BG0664540, gene-QOZ80_8BG0664550, gene-QOZ80_8BG0664560
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.2HG0206410.1.CDS1 ...
HORVU.MOREX.r3.3HG0328590.1, HORVU.MOREX.r3.3HG0328700.1, HORVU.MOREX.r3.3HG0328710.1, HORVU.MOREX.r3.7HG0657500.1.CDS1, HORVU.MOREX.r3.7HG0657550.1.CDS1, HORVU.MOREX.r3.7HG0657570.1
Poaceae Lolium multiflorum 52 gene-QYE76_000480, gene-QYE76_004239, gene-QYE76_006658 ...
gene-QYE76_006741, gene-QYE76_006742, gene-QYE76_006745, gene-QYE76_006902, gene-QYE76_007508, gene-QYE76_008741, gene-QYE76_008806, gene-QYE76_009345, gene-QYE76_013006, gene-QYE76_014394, gene-QYE76_014395, gene-QYE76_014398, gene-QYE76_014400, gene-QYE76_017334, gene-QYE76_017549, gene-QYE76_018016, gene-QYE76_019903, gene-QYE76_019904, gene-QYE76_019905, gene-QYE76_019999, gene-QYE76_020064, gene-QYE76_020070, gene-QYE76_020074, gene-QYE76_020800, gene-QYE76_030923, gene-QYE76_030925, gene-QYE76_030929, gene-QYE76_030930, gene-QYE76_037914, gene-QYE76_038422, gene-QYE76_046980, gene-QYE76_055918, gene-QYE76_056424, gene-QYE76_056426, gene-QYE76_056439, gene-QYE76_057290, gene-QYE76_058262, gene-QYE76_058263, gene-QYE76_058751, gene-QYE76_058752, gene-QYE76_058754, gene-QYE76_058755, gene-QYE76_058757, gene-QYE76_058758, gene-QYE76_058759, gene-QYE76_058761, gene-QYE76_058764, gene-QYE76_065272, gene-QYE76_071875
Poaceae Oryza coarctata 11 Oco15G011940, Oco15G011950, Oco15G011960, Oco16G010630 ...
Oco16G010640, Oco16G010890, Oco23G006760, Oco23G006770, Oco24G006440, Oco24G006460, Oco24G006470
Poaceae Oryza sativa 12 LOC_Os07g39570.1, LOC_Os08g38470.1, LOC_Os08g38480.1 ...
LOC_Os08g38490.1, LOC_Os08g38520.1, LOC_Os08g38540.1, LOC_Os12g30920.1, LOC_Os12g30940.1, LOC_Os12g30950.1, LOC_Os12g30960.1, LOC_Os12g30980.1, LOC_Os12g30990.1
Poaceae Paspalum vaginatum 3 gene-BS78_02G092300, gene-BS78_07G176700 ...
gene-BS78_07G176800
Poaceae Puccinellia tenuiflora 32 Pt_Chr0100935, Pt_Chr0200804, Pt_Chr0201487, Pt_Chr0305781 ...
Pt_Chr0305832, Pt_Chr0403309, Pt_Chr0500288, Pt_Chr0500292, Pt_Chr0500301, Pt_Chr0500302, Pt_Chr0500622, Pt_Chr0500625, Pt_Chr0500681, Pt_Chr0500684, Pt_Chr0500697, Pt_Chr0504789, Pt_Chr0504790, Pt_Chr0600892, Pt_Chr0600894, Pt_Chr0605414, Pt_Chr0605415, Pt_Chr0605417, Pt_Chr0605418, Pt_Chr0605419, Pt_Chr0605421, Pt_Chr0605424, Pt_Chr0605767, Pt_Chr0605768, Pt_Chr0605769, Pt_Chr0605772, Pt_Chr0704145, Pt_Chr0704174
Poaceae Sporobolus alterniflorus 4 Chr01G021340, Chr0G003860, Chr20G000380, Chr22G009410
Poaceae Thinopyrum elongatum 9 Tel1E01G564300, Tel2E01G139500, Tel2E01G889300 ...
Tel2E01G891100, Tel5E01G328900, Tel5E01G496600, Tel5E01G496900, Tel5E01G497000, Tel7E01G276300
Poaceae Triticum aestivum 24 TraesCS1D02G340200.1, TraesCS2A02G060300.1 ...
TraesCS2A02G060800.1, TraesCS2A02G522800.1.cds1, TraesCS2B02G552900.1.cds1, TraesCS2D02G524600.1.cds1, TraesCS2D02G524700.1.cds1, TraesCS2D02G524800.1.cds1, TraesCS2D02G525100.1.cds1, TraesCS5A02G309400.1.cds1, TraesCS5A02G309500.1.cds1, TraesCS5B02G310200.1.cds1, TraesCS5B02G310300.1.cds1, TraesCS5B02G530700.1.cds1, TraesCS5D02G316500.1.cds1, TraesCS5D02G316600.1.cds1, TraesCS7A02G140000.1.cds1, TraesCS7A02G141200.1.cds1, TraesCS7B02G041800.1.cds1, TraesCS7B02G300900.1.cds1, TraesCS7D02G141200.1.cds1, TraesCS7D02G141400.1.cds1, TraesCS7D02G142500.1.cds1, TraesCSU02G210300.1.cds1
Poaceae Zoysia japonica 1 nbis-gene-47607
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