HalophFGD

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Basic Information
Locus ID: Tel5E01G320700
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 296642206 296642671 - Tel5E01G320700
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.95 10,739.23 Da 72.74 74.00 -0.32
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 22 50 5.7E-8 IPR001810
SUPERFAMILY SSF81383 F-box domain 22 67 7.72E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 18 61 9.5E-8 -
ProSiteProfiles PS50181 F-box domain profile. 15 62 9.312009 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044397223.1 F-box/SPRY domain-containing protein 1-like [Triticum aestivum] 0
TrEMBL R7W8H5 Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Cocos nucifera 1 COCNU_06G000170
Arecaceae Phoenix dactylifera 3 gene-LOC103695921, gene-LOC120108684, gene-LOC120110423
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno12g00760
Hydrocharitaceae Thalassia testudinum 1 gene.Thate09g14050
Poaceae Echinochloa crus-galli 3 AH03.1685, BH03.1838, CH03.2019
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_6AG0533190
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.5HG0475180.1
Poaceae Lolium multiflorum 2 gene-QYE76_004593, gene-QYE76_004708
Poaceae Oryza coarctata 2 Oco17G003210, Oco18G003130
Poaceae Paspalum vaginatum 1 gene-BS78_02G162500
Poaceae Puccinellia tenuiflora 2 Pt_Chr0702523, Pt_Chr0702531
Poaceae Thinopyrum elongatum 1 Tel5E01G320700
Poaceae Triticum dicoccoides 1 gene_TRIDC5BG032370
Poaceae Triticum aestivum 3 TraesCS5A02G193600.1, TraesCS5B02G188900.1 ...
TraesCS5D02G196000.1
Poaceae Zea mays 1 Zm00001eb310820_P001
Poaceae Zoysia macrostachya 1 Zma_g30207
Posidoniaceae Posidonia oceanica 1 gene.Posoc09g10730
Zosteraceae Zostera marina 1 Zosma05g14260.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.