Basic Information
Locus ID:
Tel5E01G286600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 266852686 | 266855808 | + | Tel5E01G286600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 71,270.84 Da | 47.43 | 88.63 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 339 | 610 | 1.40407E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 338 | 601 | 2.9E-48 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 33 | 233 | 9.4E-12 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 317 | 630 | 8.5E-79 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 30 | 232 | 6.94E-21 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 309 | 408 | 1.5E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 29 | 243 | 4.9E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 409 | 615 | 6.3E-61 | - |
| SMART | SM00220 | serkin_6 | 333 | 607 | 2.2E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 624 | 37.756874 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 457 | 469 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 339 | 362 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037440711.1 | probable L-type lectin-domain containing receptor kinase S.7 [Triticum dicoccoides] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | F2DM09 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0469840.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_004134, gene-QYE76_004163 |
| Poaceae | Oryza coarctata | 1 | Oco18G000930 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g07730.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G079500 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0705076, Pt_Chr0705098 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr10G003770, Chr11G015160 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G286600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG027700, gene_TRIDC5BG029160 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G168800.1.cds1, TraesCS5B02G165600.1.cds1 ... |