Basic Information
Locus ID:
Tel5E01G249800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 233639631 | 233641377 | + | Tel5E01G249800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 60,367.55 Da | 46.44 | 97.47 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 54 | 2.09E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 146 | 471 | 1.88E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 517 | 2.5E-9 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 54 | 4.6E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 12 | 63 | 9.073559 | IPR001810 |
| Coils | Coil | Coil | 68 | 88 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044396340.1 | uncharacterized protein LOC123120416 isoform X1 [Triticum aestivum] | 0 |
| TrEMBL | A0A453KC83 | F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 10 | AH01.175, BH03.1193, BH03.3926, BH03.3928, BH05.3403 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0211990, gene-QOZ80_3AG0212950 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0517850.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_061269 |
| Poaceae | Oryza coarctata | 2 | Oco06G002870, Oco06G003350 |
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G249800, Tel5E01G674400 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC5AG024010, gene_TRIDC5AG055580 ... |
| Poaceae | Triticum aestivum | 13 | TraesCS5A02G142800.1, TraesCS5A02G380200.1 ... |