Basic Information
Locus ID:
Tel5E01G174000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 128980017 | 128985279 | + | Tel5E01G174000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 54,225.58 Da | 60.91 | 53.04 | -1.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 355 | 437 | 4.5E-19 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 453 | 484 | 5.4E-6 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 355 | 437 | 3.2E-28 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 412 | - | - |
| Coils | Coil | Coil | 389 | 416 | - | - |
| Coils | Coil | Coil | 347 | 381 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_048528695.1 | eukaryotic translation initiation factor 5B [Triticum urartu] | 0 |
| TrEMBL | M7YPL2 | PAPA-1 domain-containing protein OS=Triticum urartu OX=4572 GN=TRIUR3_09519 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology