Basic Information
Locus ID:
Tel5E01G170600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 125937875 | 125946304 | + | Tel5E01G170600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.27 | 83,342.07 Da | 54.52 | 70.82 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 482 | 728 | 2.39694E-131 | - |
| CDD | cd00130 | PAS | 119 | 220 | 4.64451E-16 | IPR000014 |
| Pfam | PF00989 | PAS fold | 111 | 218 | 7.0E-16 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 477 | 728 | 5.3E-68 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 108 | 217 | 2.27E-21 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 444 | 727 | 6.34E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 120 | 225 | 1.1E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 469 | 553 | 1.2E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 554 | 756 | 1.7E-64 | - |
| SMART | SM00220 | serkin_6 | 476 | 736 | 5.6E-56 | IPR000719 |
| SMART | SM00091 | pas_2 | 110 | 177 | 1.7E-11 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 109 | 220 | 4.2E-15 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 476 | 736 | 43.834492 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 108 | 179 | 20.082531 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 595 | 607 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 550 | 563 | 1.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 699 | 721 | 1.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 636 | 646 | 1.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 655 | 677 | 1.3E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 589 | 607 | 1.3E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 355 | - | - |
| Coils | Coil | Coil | 721 | 741 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_044949032.1 | dual specificity protein kinase shkD [Hordeum vulgare subsp. vulgare] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | F2E2Y6 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology