Basic Information
Locus ID:
Tel5E01G125800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 85080380 | 85083871 | + | Tel5E01G125800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 27,022.43 Da | 56.45 | 66.75 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 10 | 243 | 6.9E-85 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 131 | 233 | 4.02E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 131 | 246 | 2.8E-45 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 135 | 234 | 25.055532 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 108 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_037432439.1 | auxin-responsive protein IAA30-like [Triticum dicoccoides] | 0 |
| P0C132 | Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KCT6 | Auxin-responsive protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology