Basic Information
Locus ID:
Tel5E01G117400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
HMT3
Description:
betaine-homocysteine S-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 78143644 | 78147521 | - | Tel5E01G117400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 45,344.96 Da | 41.67 | 88.07 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 111 | 410 | 1.7E-76 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 108 | 417 | 3.01E-81 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 104 | 411 | 1.4E-102 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 99 | 412 | 47.328396 | IPR003726 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 79 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_044395190.1 | homocysteine S-methyltransferase 3-like isoform X1 [Triticum aestivum] | 0 |
| Q9FUM8 | Homocysteine S-methyltransferase 3 OS=Zea mays OX=4577 GN=HMT-3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453JQM4 | Hcy-binding domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology