halophFGD

Basic Information

Locus ID: Tel5E01G088500

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	62784669	62785628	+	Tel5E01G088500

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.22	35,039.46 Da	39.92	94.48	-0.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	2	100	4.73238E-21	IPR002083
CDD	cd18280	BTB_POZ_BPM_plant	126	240	3.64125E-48	-
Pfam	PF00651	BTB/POZ domain	130	242	3.4E-25	IPR000210
SUPERFAMILY	SSF54695	POZ domain	118	242	1.41E-33	IPR011333
SUPERFAMILY	SSF49599	TRAF domain-like	2	108	6.54E-23	-
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	112	238	3.1E-38	IPR011333
Gene3D	G3DSA:1.25.40.420	-	242	313	2.6E-18	-
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	1	103	3.4E-20	IPR008974
SMART	SM00225	BTB_4	137	243	7.9E-27	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	137	204	18.451389	IPR000210
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	1	99	13.84515	IPR002083

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G19000.1	BTB-POZ and MATH domain 1.
RefSeq	XP_020174099.1	BTB/POZ and MATH domain-containing protein 1-like [Aegilops tauschii subsp. strangulata]
Swiss-Prot	Q8L765	BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1
TrEMBL	A0A3B6MKI5	Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_2AG0110870, gene-QOZ80_2BG0164290 ... gene-QOZ80_2BG0164320
Poaceae	Hordeum vulgare	13	HORVU.MOREX.r3.5HG0427590.1.CDS1 ... HORVU.MOREX.r3.5HG0427600.1.CDS1, HORVU.MOREX.r3.5HG0429960.1.CDS1, HORVU.MOREX.r3.5HG0518270.1.CDS1, HORVU.MOREX.r3.5HG0518280.1.CDS1, HORVU.MOREX.r3.5HG0518360.1.CDS1, HORVU.MOREX.r3.5HG0518370.1.CDS1, HORVU.MOREX.r3.5HG0518380.1.CDS1, HORVU.MOREX.r3.5HG0518390.1.CDS1, HORVU.MOREX.r3.5HG0518410.1.CDS1, HORVU.MOREX.r3.5HG0518450.1.CDS1, HORVU.MOREX.r3.5HG0518460.1.CDS1, HORVU.MOREX.r3.5HG0518500.1.CDS1
Poaceae	Lolium multiflorum	12	gene-QYE76_009241, gene-QYE76_009243, gene-QYE76_016733 ... gene-QYE76_016734, gene-QYE76_028417, gene-QYE76_061234, gene-QYE76_061235, gene-QYE76_061248, gene-QYE76_064568, gene-QYE76_064569, gene-QYE76_071491, gene-QYE76_071492
Poaceae	Oryza coarctata	1	Oco04G008990
Poaceae	Oryza sativa	6	LOC_Os02g20590.1, LOC_Os02g20600.1, LOC_Os02g20620.1 ... LOC_Os02g20690.1, LOC_Os02g20720.1, LOC_Os10g29460.1
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0103080, Pt_Chr0103081, Pt_Chr0104126, Pt_Chr0104129 ... Pt_Chr0105447, Pt_Chr0402069, Pt_Chr0500238, Pt_Chr0500240, Pt_Chr0500246, Pt_Chr0500632, Pt_Chr0500635
Poaceae	Sporobolus alterniflorus	2	Chr09G001120, Chr09G001130
Poaceae	Thinopyrum elongatum	16	Tel1E01G144500, Tel1E01G145100, Tel1E01G145300 ... Tel2E01G982800, Tel4E01G649300, Tel5E01G088500, Tel5E01G088600, Tel5E01G108500, Tel5E01G109100, Tel5E01G681300, Tel5E01G681400, Tel5E01G681500, Tel5E01G682000, Tel5E01G682200, Tel5E01G682600, Tel6E01G719300
Poaceae	Triticum dicoccoides	21	gene_TRIDC1AG009740, gene_TRIDC1AG009770 ... gene_TRIDC1AG009780, gene_TRIDC1AG064490, gene_TRIDC1BG012680, gene_TRIDC2AG079210, gene_TRIDC2BG080030, gene_TRIDC4AG065610, gene_TRIDC5AG005580, gene_TRIDC5AG007300, gene_TRIDC5AG007350, gene_TRIDC5AG062580, gene_TRIDC5BG006060, gene_TRIDC5BG008760, gene_TRIDC5BG066970, gene_TRIDC5BG066980, gene_TRIDC5BG066990, gene_TRIDC5BG067000, gene_TRIDC5BG067010, gene_TRIDC5BG067020, gene_TRIDC7BG004270
Poaceae	Triticum aestivum	51	TraesCS1A02G070700.1.cds1, TraesCS1A02G070800.1.cds1 ... TraesCS1A02G071000.1.cds1, TraesCS1A02G380800.1.cds1, TraesCS1B02G089500.1, TraesCS1D02G073200.1.cds1, TraesCS1D02G073400.1.cds1, TraesCS1D02G449100.1.cds1, TraesCS2D02G597100.1, TraesCS5A02G035800.1.cds1, TraesCS5A02G035900.1.cds1, TraesCS5A02G047500.1.cds1, TraesCS5A02G047800.1.cds1, TraesCS5A02G434800.1, TraesCS5A02G434900.1.cds1, TraesCS5A02G435000.1.cds1, TraesCS5A02G435100.1.cds1, TraesCS5A02G435200.1.cds1, TraesCS5A02G435300.1.cds1, TraesCS5B02G036300.1, TraesCS5B02G036500.1.cds1, TraesCS5B02G052400.1.cds1, TraesCS5B02G437600.1.cds1, TraesCS5B02G437700.1.cds1, TraesCS5B02G437800.1.cds1, TraesCS5B02G437900.1.cds1, TraesCS5B02G438000.1.cds1, TraesCS5B02G438100.1.cds1, TraesCS5B02G438300.1, TraesCS5B02G438400.1.cds1, TraesCS5B02G438500.1.cds1, TraesCS5B02G438600.1.cds1, TraesCS5D02G043800.1.cds1, TraesCS5D02G043900.1.cds1, TraesCS5D02G044000.1.cds1, TraesCS5D02G058100.1.cds1, TraesCS5D02G442400.1.cds1, TraesCS5D02G442500.1.cds1, TraesCS5D02G442600.1.cds1, TraesCS5D02G442700.1.cds1, TraesCS5D02G442800.1.cds1, TraesCS5D02G442900.1.cds1, TraesCS5D02G443100.1.cds1, TraesCS6A02G398300.1.cds1, TraesCS6D02G382500.1.cds1, TraesCS7A02G112400.1.cds1, TraesCS7B02G027800.1.cds1, TraesCS7D02G126600.1.cds1, TraesCS7D02G126700.1.cds1, TraesCSU02G003100.1.cds1, TraesCSU02G188900.1.cds1
Poaceae	Zoysia japonica	1	nbis-gene-34043
Poaceae	Zoysia macrostachya	1	Zma_g21999
Tamaricaceae	Reaumuria soongarica	1	STRG.1995_chr01_-