Basic Information
Locus ID:
Tel5E01G068100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
ribosomal protein S20
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 49705640 | 49707251 | - | Tel5E01G068100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 12,299.32 Da | 30.69 | 109.82 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 65 | 106 | 5.7E-9 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 28 | 107 | 2.09E-11 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 56 | 109 | 3.7E-16 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 29 | 106 | 8.0E-6 | IPR027486 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 27 | 40 | 9.3E-7 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 67 | 81 | 9.3E-7 | IPR001848 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45030.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_044384517.1 | 40S ribosomal protein S20-like [Triticum aestivum] | 0 |
| P35686 | Small ribosomal subunit protein uS10 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2 | 0 | |
| TrEMBL | M8ABX2 | 40S ribosomal protein S20 OS=Triticum urartu OX=4572 GN=TRIUR3_13480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology