Basic Information
Locus ID:
Tel5E01G066200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 48677759 | 48684886 | + | Tel5E01G066200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 99,842.12 Da | 41.95 | 77.52 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 701 | 866 | 3.99879E-66 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 271 | 865 | 1.3E-82 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 268 | 868 | 1.26E-106 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 609 | 879 | 1.4E-56 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 261 | 491 | 1.7E-64 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 270 | 868 | 54.952274 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 809 | 826 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 271 | 286 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_044394911.1 | ubiquitin carboxyl-terminal hydrolase 8-like [Triticum aestivum] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453JK20 | Ubiquitin carboxyl-terminal hydrolase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology