Basic Information
Locus ID:
Tel5E01G044100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 31697473 | 31718598 | - | Tel5E01G044100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 15,569.55 Da | 41.11 | 69.00 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 53 | 118 | 2.1E-17 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 150 | 1.96E-38 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 52 | 150 | 1.3E-26 | IPR037176 |
| SMART | SM00205 | tha2 | 25 | 150 | 7.7E-17 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 52 | 125 | 4.4E-20 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 120 | 150 | 0.76 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 55 | 8.0E-6 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 21 | 150 | 20.335989 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 24 | 36 | 9.5E-5 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 44 | 53 | 9.5E-5 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_044949355.1 | thaumatin-like pathogenesis-related protein 4 [Hordeum vulgare subsp. vulgare] | 0 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 0 | |
| TrEMBL | Q946Z1 | Thaumatin-like protein TLP4 OS=Hordeum vulgare OX=4513 PE=2 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology