Basic Information
Locus ID:
Tel5E01G025900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 17646327 | 17648234 | + | Tel5E01G025900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.93 | 55,862.26 Da | 40.57 | 88.87 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 59 | 221 | 6.4E-18 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 396 | 464 | 3.6E-13 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 56 | 225 | 8.62E-27 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 59 | 226 | 2.2E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 57 | 225 | 3.9E-16 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 59 | 224 | 17.332285 | IPR002035 |
| Coils | Coil | Coil | 362 | 392 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_037437545.1 | probable E3 ubiquitin-protein ligase WAVH2 [Triticum dicoccoides] | 0 |
| Q9LTA6 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LEW5 | VWFA domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology