Basic Information
Locus ID:
Tel5E01G016400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
MSP (Major sperm protein) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 12449967 | 12451293 | + | Tel5E01G016400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 31,661.55 Da | 56.40 | 86.21 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 156 | 260 | 9.8E-16 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 3 | 132 | 1.7E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 140 | 3.27E-24 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 142 | 276 | 3.14E-23 | IPR008962 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 146 | 4.1E-28 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 149 | 276 | 5.6E-27 | IPR013783 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 137 | 16.145988 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 156 | 276 | 18.537258 | IPR000535 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60600.2 | vesicle associated protein. Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2. | 0 |
| RefSeq | XP_044362311.1 | putative receptor-like protein kinase At4g00960 [Triticum aestivum] | 0 |
| Q8VZ95 | Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7UAL1 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology