Basic Information
Locus ID:
Tel4E01G631200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
TD and POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 604716344 | 604717642 | + | Tel4E01G631200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 47,595.41 Da | 47.22 | 75.97 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 43 | 174 | 4.3489E-22 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 197 | 310 | 2.0E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 190 | 310 | 3.45E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 41 | 178 | 3.11E-25 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 311 | 402 | 2.1E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 184 | 307 | 1.9E-34 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 40 | 178 | 2.9E-23 | IPR008974 |
| SMART | SM00225 | BTB_4 | 205 | 312 | 1.9E-22 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 41 | 174 | 17.655006 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 205 | 272 | 16.07296 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 432 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_044367340.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6U9N6 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G631200 |
| Poaceae | Triticum aestivum | 3 | TraesCS4B02G393900.1.cds1, TraesCS5A02G522800.1.cds1 ... |