HalophFGD

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Basic Information
Locus ID: Tel4E01G618900
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: MDM2/MDM4 family protein binding
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 599465474 599467876 + Tel4E01G618900
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.33 10,254.44 Da 58.24 71.76 -0.31
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K15691 (E3 ubiquitin-protein ligase RFWD3 [EC:2.3.2.27])
Best hit
Source Best Hit ID Description E-value
RefSeq XP_040243660.2 uncharacterized protein LOC120963172 [Aegilops tauschii subsp. strangulata] 0
TrEMBL A0A453JC18 RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 1 CH01.2505
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.4HG0418480.1
Poaceae Lolium multiflorum 1 gene-QYE76_071785
Poaceae Thinopyrum elongatum 1 Tel4E01G618900
Poaceae Triticum dicoccoides 2 gene_TRIDC4BG062430, gene_TRIDC5AG077330
Poaceae Triticum aestivum 5 TraesCS4B02G380900.1, TraesCS4B02G381000.1 ...
TraesCS4B02G381100.1, TraesCS5A02G547400.1, TraesCSU02G131500.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.