Basic Information
Locus ID:
Tel4E01G600200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 591270344 | 591270985 | - | Tel4E01G600200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.77 | 23,520.10 Da | 76.55 | 75.26 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 50 | 1.1E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 80 | 8.5E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 52 | 1.5E-6 | - |
| SMART | SM00256 | fbox_2 | 16 | 56 | 7.2E-5 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 110 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051228914.1 | F-box protein At3g07870-like [Lolium perenne] | 0 |
| TrEMBL | R7WB95 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.129.V1.1, AsparagusV1_04.132.V1.1 |
| Poaceae | Echinochloa crus-galli | 12 | AH01.2284, AH01.2287, AH02.3093, BH01.2576, BH01.2577 ... |
| Poaceae | Hordeum vulgare | 5 | HORVU.MOREX.r3.2HG0112950.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 23 | gene-QYE76_000501, gene-QYE76_002124, gene-QYE76_005967 ... |
| Poaceae | Oryza coarctata | 2 | Oco09G017100, Oco09G017160 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g49450.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G236300 |
| Poaceae | Puccinellia tenuiflora | 14 | Pt_Chr0100309, Pt_Chr0100311, Pt_Chr0100312, Pt_Chr0100314 ... |
| Poaceae | Thinopyrum elongatum | 6 | Tel2E01G288800, Tel3E01G766900, Tel4E01G067300 ... |
| Poaceae | Triticum aestivum | 16 | TraesCS2A02G142000.1, TraesCS2A02G551700.1.cds1 ... |