Basic Information
Locus ID:
Tel4E01G567700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 578526471 | 578530361 | - | Tel4E01G567700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 54,885.77 Da | 45.76 | 69.42 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 212 | 488 | 1.70896E-40 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 452 | 488 | 1.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 323 | 358 | 3.3E-6 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 242 | 299 | 1.2E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 363 | 403 | 0.0034 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 191 | 511 | 4.21E-61 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 185 | 493 | 2.0E-126 | IPR015943 |
| SMART | SM00320 | WD40_4 | 235 | 275 | 0.0034 | IPR001680 |
| SMART | SM00320 | WD40_4 | 319 | 358 | 9.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 278 | 315 | 0.27 | IPR001680 |
| SMART | SM00320 | WD40_4 | 191 | 232 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 361 | 403 | 3.8E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 449 | 488 | 3.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 406 | 446 | 460.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 326 | 358 | 11.022865 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 326 | 367 | 13.315579 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 456 | 489 | 14.184453 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 456 | 489 | 11.73468 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 243 | 284 | 10.074014 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 475 | 489 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 73 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_044447297.1 | protein FIZZY-RELATED 2-like [Triticum aestivum] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IWW3 | ANAPC4_WD40 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology