HalophFGD

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Basic Information
Locus ID: Tel4E01G553100
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 570751824 570753761 - Tel4E01G553100
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.80 46,713.69 Da 58.62 76.41 -0.28
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 24 63 1.7E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 24 78 1.57E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 20 63 4.7E-7 -
SMART SM00256 fbox_2 22 64 1.1E-5 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044376956.1 uncharacterized protein LOC123098940 isoform X1 [Triticum aestivum] 0
TrEMBL A0A453J4N9 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Thinopyrum elongatum 1 Tel4E01G553100
Poaceae Triticum aestivum 5 TraesCS4B02G337700.1, TraesCS4B02G337800.1 ...
TraesCS4D02G333100.1, TraesCS4D02G333200.1, TraesCS5A02G507700.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.