Basic Information
Locus ID:
Tel4E01G529100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Fasciclin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 558099730 | 558100992 | + | Tel4E01G529100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 43,191.91 Da | 41.01 | 90.14 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 209 | 343 | 3.4E-13 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 194 | 344 | 5.1E-17 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 27 | 124 | 7.98E-10 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 195 | 343 | 1.2E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 236 | 344 | 9.9E-8 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 196 | 341 | 13.182604 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 381 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60900.1 | FASCICLIN-like arabinogalactan-protein 10. | 0 |
| RefSeq | XP_037436981.1 | fasciclin-like arabinogalactan protein 8 [Triticum dicoccoides] | 0 |
| Q9LZX4 | Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KQF6 | FAS1 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology