Basic Information
Locus ID:
Tel4E01G500900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 537165793 | 537171893 | + | Tel4E01G500900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 78,591.21 Da | 40.18 | 83.86 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 296 | 329 | 0.00504465 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 82 | 4.8E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 134 | 193 | 6.8E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 692 | 1.3E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 692 | 1.27E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 255 | 4.34E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 719 | 1.9E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 498 | 2.9E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 272 | 2.8E-43 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 156 | 179 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 180 | 203 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 204 | 226 | 36.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 695 | 33.686283 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 206 | 228 | 8.096991 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 427 | 450 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 360 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_020149950.2 | protein STRUBBELIG-RECEPTOR FAMILY 6 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6JM19 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology