HalophFGD

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Basic Information
Locus ID: Tel4E01G479400
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: F-box domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 525308877 525311774 + Tel4E01G479400
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.66 37,985.01 Da 46.41 83.94 -0.27
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 15 55 5.3E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 9 75 5.63E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 16 57 1.3E-7 -
ProSiteProfiles PS50181 F-box domain profile. 12 64 8.888098 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_020190214.2 uncharacterized protein LOC109775920 [Aegilops tauschii subsp. strangulata] 0
TrEMBL A0A3B6JPN9 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.4HG0402960.1, HORVU.MOREX.r3.4HG0403320.1 ...
HORVU.MOREX.r3.5HG0501690.1
Poaceae Lolium multiflorum 2 gene-QYE76_070487, gene-QYE76_070488
Poaceae Puccinellia tenuiflora 1 Pt_Chr0101290
Poaceae Thinopyrum elongatum 6 Tel4E01G474600, Tel4E01G479000, Tel4E01G479200 ...
Tel4E01G479400, Tel4E01G479500, Tel5E01G536700
Poaceae Triticum dicoccoides 4 gene_TRIDC4AG002500, gene_TRIDC4AG002580 ...
gene_TRIDC4BG048720, gene_TRIDC4BG049080
Poaceae Triticum aestivum 18 TraesCS4A02G018600.1.cds1, TraesCS4A02G018700.1 ...
TraesCS4A02G018800.1, TraesCS4A02G019200.1, TraesCS4B02G282400.2, TraesCS4B02G285100.1, TraesCS4B02G285200.1, TraesCS4B02G285300.2, TraesCS4D02G281400.1, TraesCS4D02G283900.1, TraesCS4D02G284000.1, TraesCS4D02G284100.1.cds1, TraesCS4D02G284200.1, TraesCS4D02G284300.1, TraesCS5A02G340100.1, TraesCS5A02G340200.1, TraesCS5B02G337800.1, TraesCS5D02G343600.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.