Basic Information
Locus ID:
Tel4E01G430400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 492188381 | 492192451 | - | Tel4E01G430400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 99,414.86 Da | 37.69 | 101.72 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03250 | ABCC_MRP_domain1 | 119 | 319 | 3.0532E-115 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 423 | 682 | 2.5716E-73 | IPR044726 |
| Pfam | PF00664 | ABC transporter transmembrane region | 425 | 524 | 1.1E-10 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 724 | 768 | 4.5E-9 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 137 | 271 | 2.2E-20 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 784 | 823 | 5.1E-6 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 526 | 635 | 2.1E-9 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 15 | 103 | 8.24E-5 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 115 | 340 | 6.74E-56 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 696 | 888 | 1.35E-45 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 422 | 689 | 2.75E-43 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 362 | 524 | 6.7E-23 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 525 | 688 | 2.5E-30 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 692 | 768 | 1.7E-18 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 1 | 101 | 5.0E-10 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 104 | 351 | 2.9E-75 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 769 | 900 | 1.8E-31 | IPR027417 |
| SMART | SM00382 | AAA_5 | 146 | 319 | 2.1E-11 | IPR003593 |
| SMART | SM00382 | AAA_5 | 733 | 867 | 5.2E-9 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 425 | 670 | 24.299892 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 119 | 342 | 22.835907 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 707 | 892 | 13.685627 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 244 | 258 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 397 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.2 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_037419932.1 | ABC transporter C family member 3-like [Triticum dicoccoides] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | M8BY89 | ABC transporter C family member 3 OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology