Basic Information
Locus ID:
Tel4E01G426800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 488398057 | 488401221 | - | Tel4E01G426800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 28,868.30 Da | 45.95 | 91.85 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 46 | 98 | 4.2E-7 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 41 | 104 | 4.12E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 35 | 139 | 1.8E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 46 | 101 | 10.158304 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 65 | 74 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 180 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037419951.1 | uncharacterized protein LOC119284885 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6HNE6 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology