Basic Information
Locus ID:
Tel4E01G402500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Cation efflux family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 465713307 | 465717569 | + | Tel4E01G402500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 44,922.29 Da | 46.91 | 103.07 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 109 | 301 | 1.1E-25 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 306 | 381 | 6.1E-12 | IPR027470 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 304 | 381 | 2.09E-15 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 100 | 302 | 1.44E-38 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 106 | 300 | 5.7E-37 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 308 | 398 | 2.3E-16 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 106 | 381 | 8.5E-34 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58060.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_037420133.1 | metal tolerance protein 4 [Triticum dicoccoides] | 0 |
| Q10PP8 | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7Q6Y5 | ZT_dimer domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology