Basic Information
Locus ID:
Tel4E01G396900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 461568349 | 461569671 | + | Tel4E01G396900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 46,615.70 Da | 41.28 | 104.14 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 25 | 97 | 1.5E-20 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 22 | 100 | 1.94E-28 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 189 | 418 | 7.97E-16 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 123 | 422 | 2.4E-14 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 6 | 103 | 6.8E-29 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 28 | 92 | 3.8E-30 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 24 | 99 | 36.454895 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_044375923.1 | U-box domain-containing protein 21-like [Triticum aestivum] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6JME3 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology