Basic Information
Locus ID:
Tel4E01G371500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Protein DA1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 434577194 | 434581483 | + | Tel4E01G371500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 57,583.08 Da | 66.70 | 62.59 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09396 | LIM_DA1 | 133 | 185 | 1.35433E-24 | - |
| Pfam | PF12315 | Protein DA1 | 282 | 497 | 2.0E-100 | IPR022087 |
| Pfam | PF00412 | LIM domain | 133 | 187 | 1.2E-9 | IPR001781 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 159 | 214 | 9.21E-7 | - |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 127 | 158 | 4.13E-7 | - |
| Gene3D | G3DSA:2.10.110.10 | Cysteine Rich Protein | 128 | 192 | 3.0E-13 | - |
| SMART | SM00132 | lim_4 | 132 | 184 | 1.7E-10 | IPR001781 |
| ProSiteProfiles | PS50023 | LIM domain profile. | 131 | 191 | 11.5336 | IPR001781 |
| ProSitePatterns | PS00478 | LIM zinc-binding domain signature. | 133 | 167 | - | IPR001781 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 99 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39830.1 | DA1-related protein 2. | 0 |
| RefSeq | XP_044375724.1 | protein DA1-related 2-like isoform X2 [Triticum aestivum] | 0 |
| Q10NJ6 | LIM domain-containing protein HDR3 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453IEP7 | LIM zinc-binding domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology