Basic Information
Locus ID:
Tel4E01G357200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
DNA (cytosine-5-)-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 418608249 | 418621792 | - | Tel4E01G357200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 151,319.81 Da | 49.30 | 70.38 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 922 | 978 | 6.30075E-29 | - |
| Pfam | PF01426 | BAH domain | 665 | 778 | 2.0E-12 | IPR001025 |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 925 | 976 | 6.5E-8 | IPR023780 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 985 | 1351 | 3.1E-35 | IPR001525 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 910 | 986 | 1.36E-11 | IPR016197 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 818 | 1352 | 1.28E-75 | IPR029063 |
| Gene3D | G3DSA:2.30.30.490 | - | 599 | 766 | 8.5E-49 | IPR043151 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 1141 | 1318 | 3.8E-219 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 820 | 1369 | 3.8E-219 | - |
| SMART | SM00298 | chromo_7 | 922 | 981 | 8.6E-4 | IPR000953 |
| SMART | SM00439 | BAH_4 | 664 | 781 | 1.8E-23 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 664 | 781 | 18.808935 | IPR001025 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 923 | 976 | 10.602701 | IPR000953 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 818 | 1359 | 43.472488 | IPR001525 |
| ProSitePatterns | PS00095 | C-5 cytosine-specific DNA methylases C-terminal signature. | 1334 | 1352 | - | IPR031303 |
| ProSitePatterns | PS00598 | Chromo domain signature. | 946 | 966 | - | IPR023779 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 993 | 1005 | - | IPR018117 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 1036 | 1050 | 4.3E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 1082 | 1095 | 4.3E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 819 | 835 | 4.3E-11 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 326 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_020194436.1 | DNA (cytosine-5)-methyltransferase CMT2 [Aegilops tauschii subsp. strangulata] | 0 |
| Q5KQL9 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453ICE7 | DNA (cytosine-5-)-methyltransferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology