Basic Information
Locus ID:
Tel4E01G306000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 360064272 | 360064736 | - | Tel4E01G306000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 16,828.52 Da | 49.80 | 90.45 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 85 | 128 | 1.5E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 82 | 134 | 1.65E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 77 | 134 | 2.0E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 86 | 127 | 4.6E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 86 | 128 | 12.607302 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14320.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_040242185.1 | LOW QUALITY PROTEIN: putative RING-H2 finger protein ATL61 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LUL6 | Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana OX=3702 GN=ATL61 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6ITA0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology