Basic Information
Locus ID:
Tel4E01G289600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 317894261 | 317919008 | - | Tel4E01G289600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 93,353.95 Da | 53.16 | 74.28 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 33 | 128 | 1.74703E-11 | - |
| CDD | cd00159 | RhoGAP | 193 | 332 | 1.08275E-30 | - |
| Pfam | PF00620 | RhoGAP domain | 193 | 337 | 9.8E-29 | IPR000198 |
| Pfam | PF00169 | PH domain | 32 | 136 | 4.3E-13 | IPR001849 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 593 | 673 | 3.9E-21 | IPR025757 |
| SUPERFAMILY | SSF50729 | PH domain-like | 26 | 143 | 1.86E-18 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 193 | 387 | 2.55E-32 | IPR008936 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 162 | 386 | 8.2E-39 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 21 | 138 | 1.1E-17 | IPR011993 |
| SMART | SM00324 | RhoGAP_3 | 190 | 381 | 1.8E-22 | IPR000198 |
| SMART | SM00233 | PH_update | 31 | 139 | 1.2E-16 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 184 | 384 | 28.530506 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 30 | 137 | 16.320601 | IPR001849 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 410 | - | - |
| Coils | Coil | Coil | 798 | 818 | - | - |
| Coils | Coil | Coil | 551 | 578 | - | - |
| Coils | Coil | Coil | 642 | 676 | - | - |
| Coils | Coil | Coil | 583 | 617 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_044375067.1 | rho GTPase-activating protein 7-like isoform X2 [Triticum aestivum] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453I1W5 | Rho GTPase-activating protein 7-like OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology