Basic Information
Locus ID:
Tel4E01G276700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 285817226 | 285825951 | + | Tel4E01G276700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 93,375.84 Da | 51.61 | 85.29 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 646 | 800 | 3.87997E-61 | - |
| Pfam | PF06337 | DUSP domain | 11 | 49 | 4.8E-10 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 229 | 799 | 3.3E-87 | IPR001394 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 403 | 543 | 2.4E-7 | IPR029346 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 227 | 802 | 1.94E-110 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 9 | 49 | 6.93E-12 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 218 | 455 | 1.0E-66 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 3 | 61 | 3.3E-17 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 538 | 807 | 5.6E-59 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 62 | 148 | 1.1E-11 | - |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 1 | 48 | 8.751205 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 229 | 802 | 58.07085 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 230 | 245 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 744 | 761 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_044374900.1 | ubiquitin carboxyl-terminal hydrolase 5-like [Triticum aestivum] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6JJR6 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology