Basic Information
Locus ID:
Tel4E01G264900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 248367368 | 248387068 | - | Tel4E01G264900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 96,622.23 Da | 39.98 | 76.01 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 184 | 512 | 1.27896E-169 | - |
| CDD | cd00121 | MATH | 43 | 159 | 1.80426E-36 | IPR002083 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 611 | 790 | 5.5E-51 | IPR024729 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 186 | 507 | 1.5E-46 | IPR001394 |
| Pfam | PF00917 | MATH domain | 49 | 168 | 3.1E-20 | IPR002083 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 181 | 537 | 7.46E-97 | IPR038765 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 39 | 171 | 4.41E-40 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 183 | 511 | 1.2E-89 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 39 | 182 | 1.3E-51 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 671 | 788 | 1.1E-43 | - |
| SMART | SM00061 | math_3 | 43 | 147 | 3.7E-20 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 186 | 510 | 40.317848 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 41 | 166 | 38.366302 | IPR002083 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 187 | 202 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 426 | 443 | - | IPR018200 |
| Coils | Coil | Coil | 526 | 546 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_048570614.1 | ubiquitin C-terminal hydrolase 12-like isoform X2 [Triticum urartu] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7U7G4 | ubiquitinyl hydrolase 1 OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology