Basic Information
Locus ID:
Tel4E01G228200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the helicase family. RecQ subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 155263392 | 155270194 | - | Tel4E01G228200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 69,428.22 Da | 36.64 | 76.67 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17920 | DEXHc_RecQ | 214 | 411 | 7.1008E-103 | - |
| CDD | cd18794 | SF2_C_RecQ | 412 | 545 | 1.62563E-64 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 222 | 391 | 6.1E-17 | IPR011545 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 431 | 535 | 3.1E-17 | IPR001650 |
| Pfam | PF16124 | RecQ zinc-binding | 548 | 617 | 4.8E-12 | IPR032284 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 260 | 556 | 8.35E-54 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 412 | 619 | 2.7E-59 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 177 | 411 | 8.6E-86 | IPR027417 |
| SMART | SM00487 | ultradead3 | 216 | 420 | 3.9E-29 | IPR014001 |
| SMART | SM00490 | helicmild6 | 454 | 536 | 9.5E-25 | IPR001650 |
| TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | 214 | 618 | 1.6E-154 | IPR004589 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 228 | 404 | 21.90814 | IPR014001 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 433 | 576 | 19.402138 | IPR001650 |
| ProSitePatterns | PS00690 | DEAH-box subfamily ATP-dependent helicases signature. | 343 | 352 | - | IPR002464 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 186 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05740.1 | RECQ helicase l1. | 0 |
| RefSeq | XP_037421267.1 | ATP-dependent DNA helicase Q-like 1 [Triticum dicoccoides] | 0 |
| Q9FT74 | ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7Q500 | ATP-dependent DNA helicase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology