Basic Information
Locus ID:
Tel4E01G189300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 120699668 | 120701398 | + | Tel4E01G189300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 21,972.08 Da | 39.44 | 86.35 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 10 | 34 | 2.0E-8 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 9 | 34 | 8.07E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 4 | 41 | 4.9E-10 | IPR013083 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 8 | 34 | 9.502048 | IPR003613 |
| Coils | Coil | Coil | 102 | 122 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044956907.1 | U-box domain-containing protein 8 [Hordeum vulgare subsp. vulgare] | 0 |
| TrEMBL | M8C5R4 | Protein FAR1-RELATED SEQUENCE OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G189300, Tel4E01G391300 |