HalophFGD

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Basic Information
Locus ID: Tel4E01G163700
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr4 100797407 100799240 - Tel4E01G163700
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.32 38,353.28 Da 66.57 97.19 -0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 53 90 8.8E-4 IPR001810
SUPERFAMILY SSF52047 RNI-like 171 329 7.06E-5 -
SUPERFAMILY SSF81383 F-box domain 42 95 2.75E-8 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044367442.1 F-box/FBD/LRR-repeat protein At5g22660-like [Triticum aestivum] 0
TrEMBL A0A3B6INC7 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 4 gene-QYE76_009256, gene-QYE76_009261, gene-QYE76_064339 ...
gene-QYE76_064445
Poaceae Paspalum vaginatum 1 gene-BS78_05G107200
Poaceae Thinopyrum elongatum 1 Tel4E01G163700
Poaceae Triticum aestivum 1 TraesCS4B02G103300.1
Poaceae Zoysia japonica 1 nbis-gene-27270
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