Basic Information
Locus ID:
Tel4E01G157400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 96341341 | 96344226 | + | Tel4E01G157400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 91,749.92 Da | 51.02 | 69.13 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 686 | 709 | 0.068 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 465 | 502 | 6.6E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 360 | 392 | 6.5E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 508 | 544 | 6.9E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 354 | 711 | 6.41E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 345 | 719 | 8.7E-60 | IPR015943 |
| SMART | SM00320 | WD40_4 | 546 | 585 | 7.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 668 | 709 | 0.0065 | IPR001680 |
| SMART | SM00320 | WD40_4 | 505 | 544 | 7.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 354 | 393 | 1.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 463 | 502 | 2.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 627 | 667 | 4.1 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 511 | 545 | 9.862871 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 361 | 402 | 14.61889 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 361 | 394 | 11.971952 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 470 | 511 | 16.623981 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 470 | 505 | 13.052855 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 511 | 545 | 11.811761 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 489 | 503 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 380 | 394 | 2.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 489 | 503 | 2.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 531 | 545 | 2.0E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 785 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| Coils | Coil | Coil | 45 | 72 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15470.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037427260.1 | WD repeat-containing protein 44-like [Triticum dicoccoides] | 0 |
| Q9R037 | WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IN91 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology